Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1466
annotation not available (255 aa)
Predicted Functional Partners:
VV0096
annotation not available
0.945
pssA
annotation not available
0.904
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
0.900
betA
Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
VV0096
VV1466
VV93_v1c00860
VV93_v1c13750
annotation not available
annotation not available
0.945
VV1465
VV1466
VV93_v1c13740
VV93_v1c13750
annotation not available
annotation not available
0.466
VV1466
VV0096
VV93_v1c13750
VV93_v1c00860
annotation not available
annotation not available
0.945
VV1466
VV1465
VV93_v1c13750
VV93_v1c13740
annotation not available
annotation not available
0.466
VV1466
VV1467
VV93_v1c13750
VV93_v1c13760
annotation not available
annotation not available
0.444
VV1466
VVA0937
VV93_v1c13750
VV93_v1c38780
annotation not available
annotation not available
0.557
VV1466
VVA0975
VV93_v1c13750
VV93_v1c39110
annotation not available
annotation not available
0.550
VV1466
VVA1402
VV93_v1c13750
VV93_v1c43090
annotation not available
annotation not available
0.557
VV1466
VVA1410
VV93_v1c13750
VV93_v1c43160
annotation not available
annotation not available
0.550
VV1466
betA
VV93_v1c13750
VV93_v1c35150
annotation not available
Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
0.802
VV1466
psd
VV93_v1c13750
VV93_v1c28070
annotation not available
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
0.900
VV1466
pssA
VV93_v1c13750
VV93_v1c28880
annotation not available
annotation not available
0.904
VV1467
VV1466
VV93_v1c13760
VV93_v1c13750
annotation not available
annotation not available
0.444
VVA0937
VV1466
VV93_v1c38780
VV93_v1c13750
annotation not available
annotation not available
0.557
VVA0937
VVA0975
VV93_v1c38780
VV93_v1c39110
annotation not available
annotation not available
0.446
VVA0937
VVA1410
VV93_v1c38780
VV93_v1c43160
annotation not available
annotation not available
0.446
VVA0975
VV1466
VV93_v1c39110
VV93_v1c13750
annotation not available
annotation not available
0.550
VVA0975
VVA0937
VV93_v1c39110
VV93_v1c38780
annotation not available
annotation not available
0.446
VVA0975
VVA1402
VV93_v1c39110
VV93_v1c43090
annotation not available
annotation not available
0.446
VVA1402
VV1466
VV93_v1c43090
VV93_v1c13750
annotation not available
annotation not available
0.557
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Network Stats
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Functional enrichments in your networkNote: some enrichments may be expected here (why?) explain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: