STRINGSTRING
VV1500 protein (Vibrio vulnificus) - STRING interaction network
"VV1500" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1500annotation not available (59 aa)    
Predicted Functional Partners:
VV3105
annotation not available (184 aa)
   
          0.661
VVA1066
annotation not available (452 aa)
   
          0.625
VV1667
annotation not available (405 aa)
   
          0.618
VVA1354
annotation not available (343 aa)
   
          0.562
VV1502
annotation not available (263 aa)
 
          0.536
malM
annotation not available (283 aa)
   
          0.492
VV2941
annotation not available (192 aa)
   
          0.487
VV1501
annotation not available (221 aa)
              0.482
nrfB
annotation not available (195 aa)
   
          0.474
VV2017
annotation not available (434 aa)
   
          0.465
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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