STRINGSTRING
VV1603 protein (Vibrio vulnificus) - STRING interaction network
"VV1603" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1603annotation not available (539 aa)    
Predicted Functional Partners:
VV1604
annotation not available (228 aa)
 
  0.988
VVA0613
annotation not available (224 aa)
 
 
  0.899
VV1525
annotation not available (323 aa)
 
          0.683
VVA0933
annotation not available (1370 aa)
         
  0.586
VV1522
annotation not available (513 aa)
 
          0.585
VV1523
annotation not available (171 aa)
 
          0.563
VVA1479
annotation not available (458 aa)
 
 
  0.496
dctD
annotation not available (446 aa)
 
 
  0.493
VV1712
annotation not available (501 aa)
 
 
 
  0.488
VVA1472
annotation not available (1328 aa)
         
  0.447
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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