STRINGSTRING
potC protein (Vibrio vulnificus) - STRING interaction network
"potC" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potCannotation not available (256 aa)    
Predicted Functional Partners:
potB
annotation not available (285 aa)
0.999
VV1689
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (343 aa)
 
  0.999
VV1690
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (350 aa)
 
  0.998
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family (371 aa)
 
  0.996
VVA0277
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (360 aa)
 
  0.994
VVA0618
annotation not available (311 aa)
     
        0.684
VV2744
annotation not available (342 aa)
 
 
  0.675
VV2066
annotation not available (292 aa)
     
        0.675
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (199 aa)
     
        0.671
VV1324
annotation not available (449 aa)
     
        0.671
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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