Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIL70744.1 | VV1754 | VV93_v1c16560 | VV93_v1c16570 | annotation not available | annotation not available | 0.514 |
| VV1173 | VV1754 | VV93_v1c10930 | VV93_v1c16570 | annotation not available | annotation not available | 0.510 |
| VV1173 | rplB | VV93_v1c10930 | VV93_v1c03490 | annotation not available | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome | 0.862 |
| VV1173 | rpsB | VV93_v1c10930 | VV93_v1c22760 | annotation not available | annotation not available | 0.853 |
| VV1173 | rpsG | VV93_v1c10930 | VV93_v1c27590 | annotation not available | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA | 0.897 |
| VV1173 | rpsN | VV93_v1c10930 | VV93_v1c03590 | annotation not available | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.894 |
| VV1173 | rpsO | VV93_v1c10930 | VV93_v1c24220 | annotation not available | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA | 0.859 |
| VV1754 | AIL70744.1 | VV93_v1c16570 | VV93_v1c16560 | annotation not available | annotation not available | 0.514 |
| VV1754 | VV1173 | VV93_v1c16570 | VV93_v1c10930 | annotation not available | annotation not available | 0.510 |
| VV1754 | VV1886 | VV93_v1c16570 | VV93_v1c16580 | annotation not available | annotation not available | 0.579 |
| VV1754 | dapF | VV93_v1c16570 | VV93_v1c00770 | annotation not available | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan | 0.492 |
| VV1754 | nnrD | VV93_v1c16570 | VV93_v1c41110 | annotation not available | Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family | 0.531 |
| VV1754 | rplB | VV93_v1c16570 | VV93_v1c03490 | annotation not available | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome | 0.479 |
| VV1754 | rpsB | VV93_v1c16570 | VV93_v1c22760 | annotation not available | annotation not available | 0.485 |
| VV1754 | rpsG | VV93_v1c16570 | VV93_v1c27590 | annotation not available | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA | 0.530 |
| VV1754 | rpsN | VV93_v1c16570 | VV93_v1c03590 | annotation not available | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.490 |
| VV1754 | rpsO | VV93_v1c16570 | VV93_v1c24220 | annotation not available | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA | 0.503 |
| VV1886 | VV1754 | VV93_v1c16580 | VV93_v1c16570 | annotation not available | annotation not available | 0.579 |
| dapF | VV1754 | VV93_v1c00770 | VV93_v1c16570 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan | annotation not available | 0.492 |
| nnrD | VV1754 | VV93_v1c41110 | VV93_v1c16570 | Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family | annotation not available | 0.531 |
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