Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70248.1 | argH | VV93_v1c11580 | VV93_v1c27270 | Diaminopimelate decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | 0.478 |
AIL70248.1 | speA | VV93_v1c11580 | VV93_v1c17470 | Diaminopimelate decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.817 |
AIL70832.1 | AIL70834.1 | VV93_v1c17460 | VV93_v1c17480 | Hydrolase. | Agmatinase; Belongs to the arginase family. | 0.537 |
AIL70832.1 | speA | VV93_v1c17460 | VV93_v1c17470 | Hydrolase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.493 |
AIL70834.1 | AIL70832.1 | VV93_v1c17480 | VV93_v1c17460 | Agmatinase; Belongs to the arginase family. | Hydrolase. | 0.537 |
AIL70834.1 | speA | VV93_v1c17480 | VV93_v1c17470 | Agmatinase; Belongs to the arginase family. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.983 |
AIL71853.1 | arcA | VV93_v1c27810 | VV93_v1c26410 | Arginine/ornithine succinyltransferase. | Arginine deiminase. | 0.925 |
AIL71853.1 | argH | VV93_v1c27810 | VV93_v1c27270 | Arginine/ornithine succinyltransferase. | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | 0.829 |
AIL71853.1 | speA | VV93_v1c27810 | VV93_v1c17470 | Arginine/ornithine succinyltransferase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.900 |
AIL72797.1 | argH | VV93_v1c37410 | VV93_v1c27270 | Arginase; Belongs to the arginase family. | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | 0.572 |
AIL72797.1 | speA | VV93_v1c37410 | VV93_v1c17470 | Arginase; Belongs to the arginase family. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.621 |
AIL72935.1 | argH | VV93_v1c38790 | VV93_v1c27270 | Arginase. | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | 0.572 |
AIL72935.1 | speA | VV93_v1c38790 | VV93_v1c17470 | Arginase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.623 |
arcA | AIL71853.1 | VV93_v1c26410 | VV93_v1c27810 | Arginine deiminase. | Arginine/ornithine succinyltransferase. | 0.925 |
arcA | argH | VV93_v1c26410 | VV93_v1c27270 | Arginine deiminase. | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | 0.931 |
arcA | speA | VV93_v1c26410 | VV93_v1c17470 | Arginine deiminase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.820 |
argH | AIL70248.1 | VV93_v1c27270 | VV93_v1c11580 | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | Diaminopimelate decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.478 |
argH | AIL71853.1 | VV93_v1c27270 | VV93_v1c27810 | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | Arginine/ornithine succinyltransferase. | 0.829 |
argH | AIL72797.1 | VV93_v1c27270 | VV93_v1c37410 | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | Arginase; Belongs to the arginase family. | 0.572 |
argH | AIL72935.1 | VV93_v1c27270 | VV93_v1c38790 | Bifunctional argininosuccinate lyase/N-acetylglutamate synthase. | Arginase. | 0.572 |
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