STRINGSTRING
lifO protein (Vibrio vulnificus) - STRING interaction network
"lifO" - Lipase chaperone in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lifOLipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm (280 aa)    
Predicted Functional Partners:
VV1990
annotation not available (302 aa)
 
 
  0.983
VVA1168
annotation not available (327 aa)
   
          0.639
VVA1166
annotation not available (442 aa)
   
          0.619
VVA0282
annotation not available (399 aa)
   
          0.612
VVA0303
annotation not available (417 aa)
 
     
  0.602
VV0802
annotation not available (493 aa)
 
 
  0.596
VVA0608
annotation not available (265 aa)
   
     
  0.592
VVA0205
annotation not available (715 aa)
   
          0.591
VV0777
annotation not available (563 aa)
   
          0.590
VV0072
annotation not available (165 aa)
   
          0.576
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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