STRINGSTRING
VV1990 protein (Vibrio vulnificus) - STRING interaction network
"VV1990" - annotation not available in Vibrio vulnificus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1990annotation not available (302 aa)    
Predicted Functional Partners:
lifO
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm (280 aa)
 
 
  0.983
VVA0247
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (118 aa)
       
  0.905
VV0296
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (129 aa)
       
  0.905
VV0494
annotation not available (601 aa)
       
  0.813
VV1053
annotation not available (565 aa)
         
    0.800
VV1991
annotation not available (153 aa)
 
          0.518
VVA1166
annotation not available (442 aa)
   
          0.451
serS
Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (435 aa)
     
      0.443
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (948 aa)
   
      0.437
VVA0516
annotation not available (337 aa)
   
        0.430
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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