VV2092 protein (Vibrio vulnificus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

VV2092

annotation not available (468 aa)

Predicted Functional Partners:

VV2091

0.606

dapB

0.572

VV2093

0.561

VVA1265

0.450

VV1956

0.449

VVA1263

0.440

VVA1264

0.434

VVA1262

0.402

glpC

0.402

Your Current Organism:

Vibrio vulnificus

NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VV1956	VV2092	VV93_v1c17160	VV93_v1c18560	annotation not available	annotation not available	0.449
VV1956	VVA1263	VV93_v1c17160	VV93_v1c41860	annotation not available	annotation not available	0.851
VV1956	VVA1264	VV93_v1c17160	VV93_v1c41870	annotation not available	annotation not available	0.856
VV1956	VVA1265	VV93_v1c17160	VV93_v1c41880	annotation not available	annotation not available	0.571
VV2091	VV2092	VV93_v1c18550	VV93_v1c18560	annotation not available	annotation not available	0.606
VV2091	VV2093	VV93_v1c18550	VV93_v1c18570	annotation not available	annotation not available	0.418
VV2092	VV1956	VV93_v1c18560	VV93_v1c17160	annotation not available	annotation not available	0.449
VV2092	VV2091	VV93_v1c18560	VV93_v1c18550	annotation not available	annotation not available	0.606
VV2092	VV2093	VV93_v1c18560	VV93_v1c18570	annotation not available	annotation not available	0.561
VV2092	VVA1262	VV93_v1c18560	VV93_v1c41850	annotation not available	annotation not available	0.402
VV2092	VVA1263	VV93_v1c18560	VV93_v1c41860	annotation not available	annotation not available	0.440
VV2092	VVA1264	VV93_v1c18560	VV93_v1c41870	annotation not available	annotation not available	0.434
VV2092	VVA1265	VV93_v1c18560	VV93_v1c41880	annotation not available	annotation not available	0.450
VV2092	dapB	VV93_v1c18560	VV93_v1c05660	annotation not available	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family	0.572
VV2092	glpC	VV93_v1c18560	VV93_v1c35280	annotation not available	annotation not available	0.402
VV2093	VV2091	VV93_v1c18570	VV93_v1c18550	annotation not available	annotation not available	0.418
VV2093	VV2092	VV93_v1c18570	VV93_v1c18560	annotation not available	annotation not available	0.561
VVA1262	VV2092	VV93_v1c41850	VV93_v1c18560	annotation not available	annotation not available	0.402
VVA1262	VVA1263	VV93_v1c41850	VV93_v1c41860	annotation not available	annotation not available	0.999
VVA1262	VVA1264	VV93_v1c41850	VV93_v1c41870	annotation not available	annotation not available	0.990

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