STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV2408annotation not available (378 aa)    
Predicted Functional Partners:
VV2407
annotation not available
 
     0.895
VV2406
annotation not available
 
     0.821
VV2031
annotation not available
  
     0.649
VV2405
annotation not available
 
     0.635
VVA0638
annotation not available
  
 
 
 0.609
VVA1285
annotation not available
  
 
 
 0.580
VV1546
annotation not available
   
 
 0.556
VV0206
annotation not available
  
 
 
 0.526
VV2888
annotation not available
  
     0.507
VV2344
annotation not available
  
     0.504
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
Server load: low (11%) [HD]