STRINGSTRING
soj protein (Vibrio vulnificus) - STRING interaction network
"soj" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojannotation not available (258 aa)    
Predicted Functional Partners:
VV2458
annotation not available (356 aa)
 
 
  0.959
VV3259
annotation not available (293 aa)
 
  0.893
VV2456
annotation not available (166 aa)
 
          0.885
cheZ
Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) (246 aa)
 
          0.884
cheB1
Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (376 aa)
 
        0.884
VV2457
annotation not available (164 aa)
 
 
 
  0.879
VV2461
annotation not available (715 aa)
 
     
  0.860
flhG
annotation not available (295 aa)
 
   
  0.772
flhF
annotation not available (487 aa)
 
   
  0.739
VV2463
annotation not available (126 aa)
 
     
  0.709
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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