STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebgACryptic beta-D-galactosidase subunit alpha. (1018 aa)    
Predicted Functional Partners:
ebgC
Cryptic beta-D-galactosidase subunit beta.
   
 0.991
AIL72231.1
Alpha-galactosidase.
 
  
 0.971
galM
Aldose 1-epimerase.
 
 
 0.953
AIL70382.1
Alpha-galactosidase.
 
  
 0.950
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.919
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.729
AIL71440.1
Oxidoreductase.
 
   
 0.590
AIL72758.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.587
aslA
Arylsulfatase.
 
 
 0.587
aslA-2
Arylsulfatase.
 
 
 0.570
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.