Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70145.1 | AIL73092.1 | VV93_v1c10520 | VV93_v1c40360 | Cysteine synthase. | Rhodanese-related sulfurtransferase. | 0.845 |
AIL70145.1 | cysC | VV93_v1c10520 | VV93_v1c03840 | Cysteine synthase. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.597 |
AIL70145.1 | cysD | VV93_v1c10520 | VV93_v1c03810 | Cysteine synthase. | Sulfate adenylyltransferase subunit 2. | 0.666 |
AIL70145.1 | cysH | VV93_v1c10520 | VV93_v1c26950 | Cysteine synthase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.482 |
AIL70145.1 | cysI | VV93_v1c10520 | VV93_v1c26960 | Cysteine synthase. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.947 |
AIL70145.1 | cysJ | VV93_v1c10520 | VV93_v1c26970 | Cysteine synthase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.955 |
AIL70145.1 | cysK | VV93_v1c10520 | VV93_v1c09050 | Cysteine synthase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.908 |
AIL70145.1 | cysN | VV93_v1c10520 | VV93_v1c03820 | Cysteine synthase. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.500 |
AIL72457.1 | cysI | VV93_v1c33950 | VV93_v1c26960 | Flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.878 |
AIL72457.1 | cysJ | VV93_v1c33950 | VV93_v1c26970 | Flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.970 |
AIL73092.1 | AIL70145.1 | VV93_v1c40360 | VV93_v1c10520 | Rhodanese-related sulfurtransferase. | Cysteine synthase. | 0.845 |
AIL73092.1 | cysH | VV93_v1c40360 | VV93_v1c26950 | Rhodanese-related sulfurtransferase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.922 |
AIL73092.1 | cysI | VV93_v1c40360 | VV93_v1c26960 | Rhodanese-related sulfurtransferase. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.936 |
AIL73092.1 | cysJ | VV93_v1c40360 | VV93_v1c26970 | Rhodanese-related sulfurtransferase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.928 |
AIL73092.1 | cysK | VV93_v1c40360 | VV93_v1c09050 | Rhodanese-related sulfurtransferase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.845 |
AIL73092.1 | glpE | VV93_v1c40360 | VV93_v1c01050 | Rhodanese-related sulfurtransferase. | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. | 0.925 |
cysC | AIL70145.1 | VV93_v1c03840 | VV93_v1c10520 | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | Cysteine synthase. | 0.597 |
cysC | cysD | VV93_v1c03840 | VV93_v1c03810 | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | Sulfate adenylyltransferase subunit 2. | 0.999 |
cysC | cysH | VV93_v1c03840 | VV93_v1c26950 | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.999 |
cysC | cysI | VV93_v1c03840 | VV93_v1c26960 | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.984 |
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