STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUM91892.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)    
Predicted Functional Partners:
KUM91891.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.875
KUM91966.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
KUM91890.1
Aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.858
KUM91965.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KUM91889.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.756
KUM91969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
KUM92976.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
KUM91893.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.608
KUM96272.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
KUM92456.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
Your Current Organism:
Streptomyces cellostaticus
NCBI taxonomy Id: 67285
Other names: ATCC 23894, CBS 680.68, DSM 40189, IFO 12849, ISP 5189, JCM 4183, JCM 4631, NBRC 12849, NCIMB 9830, NRRL-ISP 5189, S. cellostaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.