STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO54368.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. (373 aa)    
Predicted Functional Partners:
SEO54347.1
Ketosteroid isomerase homolog.
       0.773
SEP05612.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
 
  0.772
SEO54327.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  0.749
SEP19182.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.682
SEO84284.1
Alcohol dehydrogenase, propanol-preferring.
  
 
 0.665
SEP20370.1
Threonine dehydrogenase.
  
 
  0.647
SEP05022.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
  
 
 
0.524
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.521
SEO49182.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
  
 
 
0.515
SEO54386.1
Acetyl esterase.
  
    0.470
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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