STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO77735.1ABC-2 type transport system ATP-binding protein. (321 aa)    
Predicted Functional Partners:
SEO77720.1
ABC-2 type transport system permease protein.
 
 0.960
SEP21710.1
Branched-chain amino acid transport system ATP-binding protein.
 
  
 
0.903
SEO60979.1
Biotin transport system ATP-binding protein.
 
   
 
0.897
SEO96434.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
  
 
0.890
SEO69314.1
ABC-2 type transport system permease protein.
 
 0.848
SEO77709.1
Signal transduction histidine kinase.
 
  
 0.812
SEP15573.1
ABC transporter efflux protein, DrrB family.
 
 0.790
SEO40304.1
ABC-2 type transport system permease protein.
 
 0.773
SEO77694.1
Two component transcriptional regulator, LuxR family.
       0.773
SEO78839.1
ABC transporter efflux protein, DrrB family.
 
 0.764
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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