STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39602.1Extra-cytoplasmic solute receptor family protein. (320 aa)    
Predicted Functional Partners:
AMN39603.1
Extracytoplasmic binding receptor.
 
    
0.737
AMN39491.1
Tripartite tricarboxylate transporter(TTT) family protein TctA.
  
    0.730
AMN38588.1
TTT family tricarboxylate transporter.
  
    0.722
AMN44167.1
Tripartite tricarboxylate transporter TctA family.
  
    0.719
AMN44913.1
TTT family tricarboxylate transporter TctA.
  
    0.718
AMN42049.1
Tripartite tricarboxylate transporter TctA family.
  
    0.717
AMN43803.1
TTT family tricarboxylate transporter TctA.
  
    0.716
AMN39601.1
Amidohydrolase 2.
       0.601
AMN44536.1
Tricarboxylate transport membrane protein TctA.
  
    0.594
AMN39765.1
Tricarboxylate transport membrane protein.
  
    0.590
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.