STRINGSTRING
Psed_0016 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0016" - Integrase catalytic subunit in Pseudonocardia dioxanivorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0016Integrase catalytic subunit (581 aa)    
Predicted Functional Partners:
Psed_0017
IstB domain-containing protein ATP-binding protein (270 aa)
     
  0.981
Psed_3249
IstB domain-containing protein ATP-binding protein (255 aa)
     
  0.871
Psed_0910
IstB domain-containing protein ATP-binding protein (259 aa)
     
  0.867
Psed_2155
IstB domain-containing protein ATP-binding protein (259 aa)
     
  0.867
Psed_1257
IstB domain-containing protein ATP-binding protein (259 aa)
     
  0.867
Psed_0910
IstB domain-containing protein ATP-binding protein (259 aa)
     
  0.867
Psed_4858
IstB domain-containing protein ATP-binding protein (249 aa)
 
     
  0.864
Psed_0866
IstB domain-containing protein ATP-binding protein (251 aa)
 
     
  0.864
Psed_0018
Transposase mutator type (425 aa)
              0.864
Psed_0027
IstB domain-containing protein ATP-binding protein (263 aa)
 
     
  0.862
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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