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Psed_0044 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0044" - CobB/CobQ domain-containing protein glutamine amidotransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0044CobB/CobQ domain-containing protein glutamine amidotransferase (251 aa)    
Predicted Functional Partners:
Psed_0043
Hypothetical protein (446 aa)
   
  0.988
Psed_0119
FHA domain-containing protein (152 aa)
   
          0.611
Psed_5215
Cell envelope-related transcriptional attenuator (541 aa)
 
          0.487
Psed_1742
Group 1 glycosyl transferase (424 aa)
 
          0.462
Psed_3848
Cell envelope-related transcriptional attenuator (427 aa)
 
          0.462
Psed_5031
Cell envelope-related transcriptional attenuator (495 aa)
 
          0.435
Psed_0051
Cell envelope-related transcriptional attenuator (526 aa)
 
          0.426
Psed_2801
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (501 aa)
   
   
  0.423
Psed_0117
Cell cycle protein (487 aa)
 
          0.415
Psed_2327
Cobalamin (vitamin B12) biosynthesis protein CbiM (369 aa)
 
          0.414
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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