STRINGSTRING
Psed_0070 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0070" - Glyoxalase/bleomycin resistance protein/dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0070Glyoxalase/bleomycin resistance protein/dioxygenase (124 aa)    
Predicted Functional Partners:
Psed_0069
ArsR family transcriptional regulator (244 aa)
 
          0.906
Psed_0241
Hypothetical protein (121 aa)
   
          0.608
Psed_5081
DoxX family protein (142 aa)
   
          0.556
Psed_4284
Extradiol ring-cleavage dioxygenase class III protein subunit B (357 aa)
   
          0.526
Psed_0068
Pentachlorophenol monooxygenase (506 aa)
              0.524
Psed_0067
Hypothetical protein (168 aa)
              0.524
Psed_0984
Activator of Hsp90 ATPase 1 family protein (300 aa)
   
          0.471
Psed_5529
Transcription factor WhiB (94 aa)
   
          0.469
Psed_2296
Hypothetical protein (155 aa)
   
          0.461
Psed_0243
LuxR family transcriptional regulator (524 aa)
   
          0.423
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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