STRINGSTRING
crgA protein (Pseudonocardia dioxanivorans) - STRING interaction network
"crgA" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgAHypothetical protein; Involved in cell division (85 aa)    
Predicted Functional Partners:
Psed_0111
Hypothetical protein (164 aa)
              0.654
Psed_0114
Serine/threonine protein kinase with PASTA sensor(s) (643 aa)
         
  0.652
Psed_0113
Glutamine amidotransferase of anthranilate synthase (213 aa)
   
        0.644
Psed_2755
Rieske (2Fe-2S) domain-containing protein (378 aa)
   
          0.638
Psed_1086
Hypothetical protein (250 aa)
   
          0.594
Psed_5336
Chorismate mutase (94 aa)
   
        0.581
Psed_4557
Hypothetical protein (218 aa)
   
          0.576
Psed_5729
Hypothetical protein (750 aa)
   
          0.574
Psed_2756
Cytochrome c class I (286 aa)
   
          0.573
Psed_4572
Hypothetical protein (244 aa)
   
          0.570
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (12%) [HD]