STRINGSTRING
Psed_0137 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0137" - Copper resistance D domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0137Copper resistance D domain-containing protein (326 aa)    
Predicted Functional Partners:
Psed_0138
Copper resistance protein CopC (182 aa)
 
          0.907
Psed_0139
Nuclear export factor GLE1 (258 aa)
 
          0.845
Psed_1567
GtrA family protein (165 aa)
   
          0.725
Psed_0140
Hypothetical protein (166 aa)
              0.624
Psed_1064
Hypothetical protein (178 aa)
   
          0.577
Psed_0638
Major facilitator superfamily protein (382 aa)
   
          0.545
Psed_4564
Hypothetical protein (122 aa)
   
          0.540
Psed_4370
Copper resistance protein CopC (188 aa)
   
          0.497
Psed_4786
Hypothetical protein (203 aa)
   
          0.485
Psed_2021
DoxX family protein (272 aa)
   
          0.478
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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