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Psed_0144 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0144" - methylated-DNA--protein-cysteine methyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0144methylated-DNA--protein-cysteine methyltransferase (183 aa)    
Predicted Functional Partners:
Psed_0969
DNA repair protein and transcriptional regulator (514 aa)
   
 
  0.809
Psed_0290
methylated-DNA--protein-cysteine methyltransferase (245 aa)
 
          0.788
Psed_0968
methylated-DNA--protein-cysteine methyltransferase (164 aa)
   
          0.703
Psed_3588
DNA polymerase I (939 aa)
     
 
  0.695
sigA
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (461 aa)
     
 
  0.583
Psed_2978
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (348 aa)
     
 
  0.583
xerD
Tyrosine recombinase xerC (307 aa)
 
 
 
  0.581
Psed_2003
Alkylated DNA repair protein (205 aa)
 
   
  0.580
pheT
Phenylalanyl-tRNA synthetase subunit beta (846 aa)
              0.563
Psed_3467
Integrase protein (331 aa)
 
 
 
  0.559
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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