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Psed_0150 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0150" - DNA-formamidopyrimidine glycosylase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Psed_0150DNA-formamidopyrimidine glycosylase (291 aa)    
Predicted Functional Partners:
Psed_0149
Hypothetical protein (148 aa)
              0.863
fpg
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (298 aa)
   
   
0.853
Psed_2017
DNA-formamidopyrimidine glycosylase (268 aa)
   
   
 
0.852
Psed_0151
Signal transduction histidine kinase LytS (402 aa)
              0.845
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.813
Psed_3283
5’-3’ exonuclease (312 aa)
 
   
  0.650
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (301 aa)
   
  0.633
Psed_0152
Peptidase S49 (293 aa)
              0.624
Psed_0148
Cupin (180 aa)
              0.609
Psed_6107
HhH-GPD family protein (294 aa)
   
 
  0.558
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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