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Psed_0159 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0159" - FAD-binding 9 siderophore-interacting domain-containing protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0159FAD-binding 9 siderophore-interacting domain-containing protein (315 aa)    
Predicted Functional Partners:
Psed_3873
Type 11 methyltransferase (290 aa)
   
          0.754
Psed_0158
Hypothetical protein (353 aa)
              0.743
Psed_6602
Von Willebrand factor A (818 aa)
   
          0.728
Psed_3321
RecB family exonuclease (371 aa)
   
          0.719
Psed_1530
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (97 aa)
   
          0.659
Psed_0160
3-oxoacyl-ACP reductase (311 aa)
              0.625
Psed_4216
ErfK/YbiS/YcfS/YnhG family protein (218 aa)
   
          0.623
Psed_1712
DivIVA domain-containing protein (304 aa)
   
          0.620
leuS
leucyl-tRNA synthetase (956 aa)
   
          0.595
Psed_4584
Hypothetical protein (235 aa)
   
          0.594
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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