STRINGSTRING
Psed_0171 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0171" - Trypanothione synthase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0171Trypanothione synthase (388 aa)    
Predicted Functional Partners:
Psed_0172
Hypothetical protein (150 aa)
 
          0.921
Psed_0170
Hypothetical protein (228 aa)
              0.859
Psed_0173
HAD-superfamily hydrolase (282 aa)
              0.663
Psed_0169
Hypothetical protein (407 aa)
              0.641
Psed_0168
Hypothetical protein (116 aa)
              0.617
Psed_0174
Phosphoesterase PA-phosphatase-like protein (215 aa)
              0.484
Psed_0176
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (303 aa)
              0.448
Psed_0175
UbiA prenyltransferase (306 aa)
              0.441
Psed_0177
dTDP-glucose 4,6-dehydratase (324 aa)
              0.433
Psed_6200
PspA/IM30 family protein (212 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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