STRINGSTRING
Psed_0172 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0172" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0172Hypothetical protein (150 aa)    
Predicted Functional Partners:
Psed_0171
Trypanothione synthase (388 aa)
 
          0.921
Psed_0170
Hypothetical protein (228 aa)
              0.779
Psed_0173
HAD-superfamily hydrolase (282 aa)
              0.724
Psed_0169
Hypothetical protein (407 aa)
 
          0.687
Psed_3345
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (399 aa)
 
          0.654
Psed_1066
RecB family exonuclease (296 aa)
   
          0.601
Psed_2007
Hypothetical protein (259 aa)
   
          0.573
Psed_4053
Hypothetical protein (595 aa)
   
          0.572
Psed_0168
Hypothetical protein (116 aa)
              0.555
Psed_0174
Phosphoesterase PA-phosphatase-like protein (215 aa)
              0.524
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (17%) [HD]