STRINGSTRING
Psed_0190 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0190" - Acyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0190Acyltransferase (467 aa)    
Predicted Functional Partners:
Psed_0192
Nitroreductase (221 aa)
              0.687
Psed_0191
Hypothetical protein (219 aa)
              0.686
Psed_6643
Hypothetical protein (207 aa)
   
          0.548
Psed_0189
Cell wall arabinan synthesis protein (995 aa)
              0.502
Psed_1882
Polysaccharide biosynthesis protein (1377 aa)
   
   
  0.473
Psed_0193
Hypothetical protein (668 aa)
              0.463
Psed_0728
Diacylglycerol kinase catalytic subunit (296 aa)
   
          0.453
obg
GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control (523 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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