STRINGSTRING
Psed_0282 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0282" - Esterase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0282Esterase (427 aa)    
Predicted Functional Partners:
Psed_0281
Hypothetical protein (713 aa)
 
          0.972
Psed_3073
Hypothetical protein (789 aa)
 
          0.849
Psed_5453
Molecular chaperone GroES (380 aa)
   
 
  0.822
Psed_1492
Alcohol dehydrogenase (373 aa)
   
 
  0.822
Psed_0661
Molecular chaperone GroES (370 aa)
   
 
  0.822
Psed_0641
Mycothiol-dependent formaldehyde dehydrogenase (361 aa)
   
 
  0.822
Psed_4706
Transmembrane protein (133 aa)
   
          0.615
Psed_0283
Glyoxalase/bleomycin resistance protein/dioxygenase (139 aa)
              0.605
Psed_4077
Hypothetical protein (393 aa)
   
          0.578
Psed_3061
Hypothetical protein (318 aa)
   
          0.570
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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