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Psed_0290 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0290" - methylated-DNA--protein-cysteine methyltransferase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0290methylated-DNA--protein-cysteine methyltransferase (245 aa)    
Predicted Functional Partners:
Psed_0291
ECF subfamily RNA polymerase sigma-24 subunit (203 aa)
         
  0.881
Psed_0969
DNA repair protein and transcriptional regulator (514 aa)
 
 
  0.841
Psed_0144
methylated-DNA--protein-cysteine methyltransferase (183 aa)
 
          0.788
Psed_0292
Alpha/beta hydrolase (282 aa)
              0.724
Psed_0293
long-chain-fatty-acid--CoA ligase (462 aa)
              0.717
sigA
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (461 aa)
     
 
  0.711
Psed_2978
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (348 aa)
     
 
  0.711
Psed_3588
DNA polymerase I (939 aa)
     
 
  0.695
xerD
Tyrosine recombinase xerC (307 aa)
 
 
 
  0.605
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (299 aa)
 
     
  0.592
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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