STRINGSTRING
Psed_0311 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0311" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0311TetR family transcriptional regulator (216 aa)    
Predicted Functional Partners:
Psed_0310
Xenobiotic-transporting ATPase (577 aa)
 
          0.901
Psed_0309
Xenobiotic-transporting ATPase (668 aa)
 
          0.900
Psed_0312
Sulfate transporter/antisigma-factor antagonist STAS (139 aa)
              0.593
Psed_4384
Type IV secretory pathway VirD4 protein-like protein (624 aa)
   
          0.584
Psed_0031
Type IV secretory pathway VirD4 protein-like protein (619 aa)
   
          0.566
Psed_4380
TrwC relaxase (1457 aa)
   
          0.561
Psed_0035
TrwC relaxase (1465 aa)
   
          0.543
Psed_2613
Coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase (277 aa)
   
          0.519
Psed_6412
Histidine kinase (364 aa)
   
          0.502
Psed_3531
Ankyrin (504 aa)
   
          0.492
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]