STRINGSTRING
Psed_0325 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0325" - Glyoxalase/bleomycin resistance protein/dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0325Glyoxalase/bleomycin resistance protein/dioxygenase (206 aa)    
Predicted Functional Partners:
Psed_4409
methylmalonyl-CoA mutase large subunit (1081 aa)
   
   
  0.971
Psed_1955
Glutamate synthase (1522 aa)
   
 
  0.916
Psed_3125
methylmalonyl-CoA mutase large subunit (726 aa)
   
   
  0.777
Psed_3124
methylmalonyl-CoA mutase (640 aa)
   
   
  0.777
Psed_1691
methylmalonyl-CoA mutase large subunit (663 aa)
   
   
  0.777
Psed_4005
Carbamoyl-phosphate synthase L chain ATP-binding protein (1086 aa)
   
   
  0.728
Psed_0324
Purine or other phosphorylase 1 (254 aa)
              0.665
Psed_6157
methylcrotonoyl-CoA carboxylase (530 aa)
   
   
  0.534
Psed_5277
propionyl-CoA carboxylase (508 aa)
   
   
  0.534
Psed_5261
propionyl-CoA carboxylase (553 aa)
   
   
  0.534
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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