STRINGSTRING
Psed_0345 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0345" - Ureidoglycolate lyase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0345Ureidoglycolate lyase (296 aa)    
Predicted Functional Partners:
Psed_6167
Urea amidolyase (282 aa)
   
 
    0.908
alc
Allantoicase (309 aa)
     
 
    0.905
Psed_0344
Alpha/beta hydrolase (253 aa)
            0.825
Psed_0343
Amidohydrolase (429 aa)
 
        0.696
Psed_6345
Homogentisate 12-dioxygenase (399 aa)
   
   
  0.637
Psed_0346
GntR family transcriptional regulator (220 aa)
              0.615
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
     
      0.609
Psed_4293
2-oxopent-4-enoate hydratase (269 aa)
   
   
  0.571
Psed_4292
4-oxalocrotonate decarboxylase (256 aa)
   
   
  0.571
Psed_4285
2-oxopent-4-enoate hydratase (277 aa)
   
   
  0.571
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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