STRINGSTRING
Psed_0391 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0391" - Metallophosphoesterase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0391Metallophosphoesterase (312 aa)    
Predicted Functional Partners:
Psed_0392
Hypothetical protein (162 aa)
              0.790
Psed_5608
ResB family protein (635 aa)
   
        0.722
Psed_6499
Hypothetical protein (59 aa)
 
          0.690
Psed_0826
Glycosyl transferase protein (527 aa)
   
          0.631
Psed_4371
Lysyl tRNA synthetase-like protein (127 aa)
   
          0.619
Psed_3991
Hypothetical protein (111 aa)
   
          0.595
Psed_2896
Chlorite dismutase (231 aa)
 
        0.593
Psed_2756
Cytochrome c class I (286 aa)
   
          0.579
Psed_2991
Type III restriction protein res subunit (576 aa)
   
          0.574
Psed_5607
Cytochrome c-type biogenesis protein CcsB (324 aa)
 
        0.566
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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