STRINGSTRING
Psed_0418 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0418" - Soluble epoxide hydrolase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0418Soluble epoxide hydrolase (328 aa)    
Predicted Functional Partners:
Psed_0417
Hypothetical protein (161 aa)
   
        0.884
Psed_6109
Alpha/beta hydrolase (275 aa)
   
          0.757
Psed_6146
Alpha/beta hydrolase (275 aa)
   
        0.741
Psed_5284
Alpha/beta hydrolase (272 aa)
   
        0.723
Psed_4327
Alpha/beta hydrolase (286 aa)
   
          0.716
Psed_2440
Alpha/beta hydrolase (270 aa)
   
        0.714
Psed_2261
Alpha/beta hydrolase (263 aa)
   
          0.686
Psed_3753
Alpha/beta hydrolase (258 aa)
   
        0.677
Psed_0416
Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (406 aa)
              0.669
Psed_4074
Alpha/beta hydrolase (255 aa)
   
          0.659
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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