STRINGSTRING
Psed_0435 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0435" - Histidine kinase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0435Histidine kinase (596 aa)    
Predicted Functional Partners:
Psed_0434
Response regulator receiver modulated serine phosphatase (397 aa)
 
  0.989
Psed_0436
Response regulator receiver protein (147 aa)
 
  0.986
Psed_2308
Response regulator receiver modulated serine phosphatase (562 aa)
 
 
  0.927
Psed_6031
Response regulator receiver protein (149 aa)
 
 
  0.897
Psed_0548
PAS/PAC sensor protein (1401 aa)
 
 
  0.864
Psed_4754
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.853
Psed_4753
Nitrogen regulatory protein P-II (127 aa)
   
 
  0.853
Psed_4751
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.853
Psed_2311
Chemotaxis protein CheB (352 aa)
   
  0.762
Psed_5638
Winged helix family two component transcriptional regulator (229 aa)
 
  0.746
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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