STRINGSTRING
Psed_0448 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0448" - Folate-binding protein YgfZ in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0448Folate-binding protein YgfZ (362 aa)    
Predicted Functional Partners:
Psed_0449
Fur family ferric uptake regulator (159 aa)
         
  0.881
Psed_4555
Iron-sulfur cluster assembly accessory protein (124 aa)
 
 
  0.719
Psed_0450
Hypothetical protein (802 aa)
              0.552
Psed_5185
Thymidylate kinase (214 aa)
 
          0.542
Psed_3378
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine (369 aa)
   
   
  0.523
Psed_2552
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine (370 aa)
   
   
  0.517
Psed_0608
Hypothetical protein (484 aa)
   
          0.517
Psed_0452
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands (214 aa)
 
          0.495
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (183 aa)
 
          0.491
Psed_0451
Hypothetical protein (625 aa)
              0.463
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (14%) [HD]