STRINGSTRING
Psed_0488 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0488" - Cyclohexanone monooxygenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0488Cyclohexanone monooxygenase (536 aa)    
Predicted Functional Partners:
Psed_0489
Alpha/beta hydrolase (302 aa)
     
  0.964
Psed_2686
SMP-30/Gluconolaconase/LRE-like region-containing protein (306 aa)
 
 
    0.917
Psed_2683
SMP-30/Gluconolaconase/LRE-like region-containing protein (316 aa)
 
 
    0.915
Psed_0487
Hypothetical protein (60 aa)
              0.738
Psed_1769
Xanthine permease (619 aa)
   
        0.553
Psed_0486
Glyoxalase/bleomycin resistance protein/dioxygenase (208 aa)
              0.546
Psed_3640
Hypothetical protein (109 aa)
         
  0.463
Psed_0490
Fis family transcriptional regulator (575 aa)
              0.462
Psed_0485
Hypothetical protein (130 aa)
              0.459
Psed_5106
Radical SAM domain-containing protein (408 aa)
         
  0.458
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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