STRINGSTRING
Psed_0490 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0490" - Fis family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0490Fis family transcriptional regulator (575 aa)    
Predicted Functional Partners:
Psed_2973
Dihydroxyacetone kinase subunit DhaL (209 aa)
   
      0.662
Psed_2972
Dihydroxyacetone kinase subunit DhaK (333 aa)
   
      0.662
Psed_0489
Alpha/beta hydrolase (302 aa)
         
  0.583
Psed_0131
Molecular chaperone GroES (342 aa)
 
     
  0.526
Psed_0629
Methane monooxygenase (550 aa)
 
     
  0.465
Psed_0488
Cyclohexanone monooxygenase (536 aa)
              0.462
Psed_6112
Phytochrome sensor protein (224 aa)
   
          0.439
Psed_0631
Methane/phenol/toluene hydroxylase (395 aa)
 
          0.430
Psed_0486
Glyoxalase/bleomycin resistance protein/dioxygenase (208 aa)
 
          0.419
Psed_0632
Monooxygenase component MmoB/DmpM (125 aa)
 
          0.415
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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