STRINGSTRING
Psed_0494 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0494" - Cytochrome P450 in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0494Cytochrome P450 (396 aa)    
Predicted Functional Partners:
Psed_3265
Cytochrome P450 (403 aa)
   
          0.778
Psed_1472
Cytochrome P450 (401 aa)
   
          0.778
Psed_2588
Cytochrome P450 (413 aa)
   
          0.774
Psed_2751
ferredoxin-NADP reductase (456 aa)
       
  0.746
Psed_1954
Glutamate synthase, NADH/NADPH small subunit (484 aa)
       
  0.746
Psed_2558
Cytochrome P450 (356 aa)
   
          0.744
Psed_0495
TetR family transcriptional regulator (359 aa)
 
          0.694
Psed_1477
Cytochrome P450 (407 aa)
   
          0.640
Psed_0493
NADPH-quinone reductase (330 aa)
   
   
  0.524
Psed_4248
NADPH dehydrogenase (748 aa)
   
 
  0.513
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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