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Psed_0518 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0518" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0518TetR family transcriptional regulator (214 aa)    
Predicted Functional Partners:
Psed_0516
enoyl-CoA hydratase (255 aa)
              0.860
Psed_0517
propionyl-CoA carboxylase (465 aa)
              0.860
Psed_0520
3-oxoacyl-ACP reductase (277 aa)
              0.859
Psed_0519
acyl-CoA dehydrogenase (416 aa)
              0.859
Psed_0523
(R)-benzylsuccinyl-CoA dehydrogenase (432 aa)
 
          0.843
Psed_0521
Hypothetical protein (138 aa)
 
          0.837
Psed_0522
propanoyl-CoA C-acyltransferase (383 aa)
              0.806
Psed_0524
acyl-CoA dehydrogenase (368 aa)
              0.761
Psed_0515
alpha-methylacyl-CoA racemase (378 aa)
              0.637
Psed_5472
LuxR family transcriptional regulator (1033 aa)
   
          0.420
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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