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Psed_0545 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0545" - Cna B domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0545Cna B domain-containing protein (1071 aa)    
Predicted Functional Partners:
Psed_0546
Alpha/beta hydrolase (281 aa)
              0.859
Psed_4869
Peptidase M48 Ste24p (379 aa)
   
          0.613
Psed_5987
Hypothetical protein (157 aa)
   
          0.583
Psed_4461
Hypothetical protein (116 aa)
   
          0.578
Psed_3686
Hypothetical protein (309 aa)
   
          0.553
Psed_4931
ABC transporter substrate-binding protein (367 aa)
   
          0.550
Psed_5949
Hypothetical protein (429 aa)
   
          0.529
Psed_0544
4-alpha-glucanotransferase (647 aa)
              0.514
Psed_2881
F420-dependent protein (154 aa)
   
          0.505
Psed_6023
Hypothetical protein (314 aa)
   
          0.500
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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