STRINGSTRING
Psed_0549 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0549" - Cysteine dioxygenase type I in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0549Cysteine dioxygenase type I (175 aa)    
Predicted Functional Partners:
Psed_0550
Rhodanese-like protein (125 aa)
          0.995
Psed_4078
Hypothetical protein (243 aa)
   
          0.644
Psed_5836
Hypothetical protein (98 aa)
   
          0.633
Psed_2460
Hypothetical protein (215 aa)
   
          0.562
Psed_1081
Hypothetical protein (326 aa)
   
          0.549
Psed_3989
Hypothetical protein (246 aa)
   
          0.523
Psed_0947
Hypothetical protein (203 aa)
   
          0.510
Psed_0548
PAS/PAC sensor protein (1401 aa)
              0.483
Psed_0330
Hypothetical protein (197 aa)
   
          0.467
Psed_0547
Acetoacetate decarboxylase (229 aa)
 
          0.451
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]