STRINGSTRING
Psed_0550 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0550" - Rhodanese-like protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0550Rhodanese-like protein (125 aa)    
Predicted Functional Partners:
Psed_0549
Cysteine dioxygenase type I (175 aa)
          0.995
Psed_5735
Molybdopterin biosynthesis MoaE protein (142 aa)
   
  0.868
Psed_1775
Cysteine desulfurase (477 aa)
   
  0.862
Psed_4066
Type III restriction protein res subunit (1028 aa)
     
      0.846
Psed_1510
Sulfur carrier protein ThiS (91 aa)
 
 
  0.752
Psed_5661
Sulfur carrier protein ThiS (90 aa)
     
  0.710
groS
Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (96 aa)
   
 
  0.567
Psed_4333
UBA/THIF-type NAD/FAD binding protein (435 aa)
   
 
  0.566
Psed_1083
UBA/THIF-type NAD/FAD binding protein (390 aa)
   
 
  0.566
Psed_5687
2,4-dienoyl-CoA reductase (650 aa)
   
   
  0.525
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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