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Psed_0649 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0649" - 3-hydroxybutyryl-CoA epimerase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_06493-hydroxybutyryl-CoA epimerase (720 aa)    
Predicted Functional Partners:
Psed_0648
acetyl-CoA acetyltransferase (406 aa)
  0.999
Psed_6174
acetyl-CoA acetyltransferase (426 aa)
 
  0.999
Psed_5500
acetyl-CoA acetyltransferase (392 aa)
  0.999
Psed_6148
acetyl-CoA acetyltransferase (403 aa)
 
  0.999
Psed_4924
acetyl-CoA acetyltransferase (403 aa)
 
  0.999
Psed_4000
acetyl-CoA acetyltransferase (381 aa)
 
  0.999
Psed_3737
propanoyl-CoA C-acyltransferase (397 aa)
   
  0.999
Psed_2633
acetyl-CoA acetyltransferase (392 aa)
 
  0.999
Psed_2572
acetyl-CoA acetyltransferase (393 aa)
 
  0.999
Psed_1715
acetyl-CoA acetyltransferase (396 aa)
 
  0.999
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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