STRINGSTRING
Psed_0669 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0669" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0669Hypothetical protein (316 aa)    
Predicted Functional Partners:
Psed_0670
Hypothetical protein (328 aa)
 
       
0.863
Psed_1024
Hypothetical protein (197 aa)
 
          0.799
Psed_0668
Hypothetical protein (94 aa)
              0.596
Psed_6178
Hypothetical protein (202 aa)
   
          0.587
Psed_5822
G-D-S-L family lipolytic protein (266 aa)
   
          0.585
Psed_1769
Xanthine permease (619 aa)
   
          0.543
Psed_0671
Hypothetical protein (145 aa)
              0.527
Psed_6192
Hypothetical protein (227 aa)
   
          0.468
Psed_4687
Hypothetical protein (248 aa)
   
          0.417
Psed_0672
Glyoxalase/bleomycin resistance protein/dioxygenase (134 aa)
              0.411
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]