STRINGSTRING
Psed_0675 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0675" - HxlR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0675HxlR family transcriptional regulator (241 aa)    
Predicted Functional Partners:
Psed_4945
HxlR family transcriptional regulator (186 aa)
   
          0.778
Psed_0676
acyl-CoA dehydrogenase (372 aa)
              0.666
Psed_4248
NADPH dehydrogenase (748 aa)
 
     
  0.477
Psed_4186
2,4-dienoyl-CoA reductase (673 aa)
 
          0.458
Psed_3214
NmrA family protein (293 aa)
   
        0.424
Psed_2962
Hypothetical protein (276 aa)
   
        0.424
Psed_0237
NmrA family protein (302 aa)
   
        0.424
Psed_0135
NAD-dependent epimerase/dehydratase (218 aa)
   
        0.424
Psed_2730
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (581 aa)
   
        0.422
azoR
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity (208 aa)
         
  0.420
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]