STRINGSTRING
Psed_0676 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0676" - acyl-CoA dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0676acyl-CoA dehydrogenase (372 aa)    
Predicted Functional Partners:
Psed_0642
enoyl-CoA hydratase (250 aa)
   
   
    0.913
Psed_4981
enoyl-CoA hydratase (252 aa)
   
   
    0.911
Psed_6221
long-chain-fatty-acid--CoA ligase (509 aa)
       
    0.901
Psed_5917
long-chain-fatty-acid--CoA ligase (633 aa)
       
    0.901
Psed_5652
long-chain-fatty-acid--CoA ligase (554 aa)
       
    0.901
Psed_5624
long-chain-fatty-acid--CoA ligase (542 aa)
       
    0.901
Psed_5507
long-chain-fatty-acid--CoA ligase (529 aa)
       
    0.901
Psed_5437
long-chain-fatty-acid--CoA ligase (562 aa)
       
    0.901
Psed_5280
long-chain-fatty-acid--CoA ligase (536 aa)
       
    0.901
Psed_5189
long-chain-fatty-acid--CoA ligase (547 aa)
       
    0.901
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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