STRINGSTRING
Psed_0703 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0703" - MMPL domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0703MMPL domain-containing protein (689 aa)    
Predicted Functional Partners:
Psed_0702
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism (340 aa)
              0.607
Psed_0704
GAF sensor-containing protein serine/threonine phosphatase (419 aa)
              0.474
Psed_4965
ABC transporter (272 aa)
 
          0.473
Psed_2893
Hypothetical protein (197 aa)
   
          0.441
Psed_6089
ABC transporter (261 aa)
 
          0.439
Psed_3129
Hypothetical protein (280 aa)
   
          0.434
Psed_0585
ABC transporter (267 aa)
 
          0.411
Psed_4029
GntR family transcriptional regulator (229 aa)
   
          0.403
Psed_0250
Xenobiotic-transporting ATPase (572 aa)
   
          0.401
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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