STRINGSTRING
Psed_0725 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0725" - Acid phosphatase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0725Acid phosphatase (311 aa)    
Predicted Functional Partners:
Psed_5823
Ectoine hydroxylase (303 aa)
         
    0.900
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (221 aa)
         
    0.900
Psed_0727
Sulfatase (791 aa)
 
          0.897
Psed_3133
Hypothetical protein (443 aa)
 
          0.775
Psed_0726
Sulfatase-modifying factor protein (302 aa)
 
          0.774
Psed_0412
Hypothetical protein (296 aa)
 
          0.549
Psed_0067
Hypothetical protein (168 aa)
 
          0.548
Psed_3373
Hypothetical protein (325 aa)
 
          0.533
Psed_4268
Hypothetical protein (174 aa)
 
          0.513
Psed_2645
Hypothetical protein (316 aa)
   
          0.406
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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